Package: bkmrhat 1.1.3

bkmrhat: Parallel Chain Tools for Bayesian Kernel Machine Regression

Bayesian kernel machine regression (from the 'bkmr' package) is a Bayesian semi-parametric generalized linear model approach under identity and probit links. There are a number of functions in this package that extend Bayesian kernel machine regression fits to allow multiple-chain inference and diagnostics, which leverage functions from the 'future', 'rstan', and 'coda' packages. Reference: Bobb, J. F., Henn, B. C., Valeri, L., & Coull, B. A. (2018). Statistical software for analyzing the health effects of multiple concurrent exposures via Bayesian kernel machine regression. ; <doi:10.1186/s12940-018-0413-y>.

Authors:Alexander Keil [aut, cre]

bkmrhat_1.1.3.tar.gz
bkmrhat_1.1.3.zip(r-4.5)bkmrhat_1.1.3.zip(r-4.4)bkmrhat_1.1.3.zip(r-4.3)
bkmrhat_1.1.3.tgz(r-4.4-any)bkmrhat_1.1.3.tgz(r-4.3-any)
bkmrhat_1.1.3.tar.gz(r-4.5-noble)bkmrhat_1.1.3.tar.gz(r-4.4-noble)
bkmrhat_1.1.3.tgz(r-4.4-emscripten)bkmrhat_1.1.3.tgz(r-4.3-emscripten)
bkmrhat.pdf |bkmrhat.html✨
bkmrhat/json (API)
NEWS

# Install 'bkmrhat' in R:
install.packages('bkmrhat', repos = c('https://alexpkeil1.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/alexpkeil1/bkmrhat/issues

On CRAN:

15 exports 5 stars 1.11 score 78 dependencies 9 scripts 369 downloads

Last updated 2 years agofrom:13a4c2bdb1. Checks:OK: 7. Indexed: yes.

TargetResultDate
Doc / VignettesOKSep 10 2024
R-4.5-winOKSep 10 2024
R-4.5-linuxOKSep 10 2024
R-4.4-winOKSep 10 2024
R-4.4-macOKSep 10 2024
R-4.3-winOKSep 10 2024
R-4.3-macOKSep 10 2024

Exports:comb_bkmrfitscomb_bkmrfits_lowmemExtractPIPs_parallelkmbayes_combinekmbayes_combine_lowmemkmbayes_continuekmbayes_diagkmbayes_diagnosekmbayes_parallelkmbayes_parallel_continueOverallRiskSummaries_parallelPredictorResponseBivar_parallelPredictorResponseUnivar_parallelSamplePred_parallelSingVarRiskSummaries_parallel

Dependencies:abindbackportsBHbkmrcallrcheckmateclicodacodetoolscolorspacecpp11data.tabledescdigestdistributionaldotCall64dplyrfansifarverfieldsfuturegenericsggplot2globalsgluegmmgridExtragtableinlineisobandlabelinglatticelifecyclelistenvloomagrittrmapsMASSMatrixmatrixStatsmgcvmunsellmvtnormnlmenumDerivparallellypillarpkgbuildpkgconfigposteriorprocessxpspurrrQuickJSRR6RColorBrewerRcppRcppEigenRcppParallelrlangrstansandwichscalesspamStanHeadersstringistringrtensorAtibbletidyrtidyselecttmvtnormtruncnormutf8vctrsviridisLitewithrzoo

The bkmrhat package: diagnostics and multi-chain inference in Bayesian kernel machine regression

Alexander Keil

Rendered frombkmrhat-vignette.Rmdusingknitr::knitron Sep 10 2024.

Last update: 2021-09-05
Started: 2020-08-30